For me it was enough to run next commands from git bash:
$git config --global diff.tool bc3
$git config --global difftool.bc3.path C\:/Program\ Files\ \(x86\)/Beyond\ Compare\ 3/BCompare.exe
$git config --global difftool.prompt false
Then you can use difftool command to see differences for each file which is modified:
$git difftool
$git config --global diff.tool bc3
$git config --global difftool.bc3.path C\:/Program\ Files\ \(x86\)/Beyond\ Compare\ 3/BCompare.exe
$git config --global difftool.prompt false
$git difftool